Search: "handoff"

Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.

Formats and structurally validates local treatment-plan documentation after clinical decisions have already been supplied and verified by authorized licensed professionals. Use for source traceability, clinician-authored intervention records, goals and checkpoints, shared-decision records, reconciliation handoffs, and release gates—not for clinical decision-making.

Design Tandem mission blueprints with scoped workstreams, explicit handoffs, review gates, and prompts that compile into reliable staged missions.

Convert human operational intent into a Tandem mission blueprint with phased workstreams, explicit handoffs, reusable outputs, and recurrence-aware setup.

Convert human operational intent into a Tandem mission blueprint with phased workstreams, explicit handoffs, reusable outputs, and recurrence-aware setup.

Design Tandem mission blueprints with scoped workstreams, explicit handoffs, review gates, and prompts that compile into reliable staged missions.

Write a short end-of-session handoff covering what changed, what is left, and how to resume. Use when wrapping up a Cursor or Hermes session.

Discover OP-verified merchants accepting Lightning, BOLT12, L402, or USDT, and complete payment handoff. Use when an agent needs to find a merchant on Bitcoin/Tether rails or check a merchant's payment endpoint before transacting.