Search: "repos"

Triages a repository's open GitHub issues and pull requests via the gh CLI. Optionally reviews and merges ready PRs — incrementally merging passing automated/bot PRs and maintainer-approved ones, and spawning review subagents for never-reviewed ones — then closes already-resolved issues with comments citing the resolving PR or commit, cross-links issues with their pending fix PRs, and assigns local-only priority and change-size estimates for everything outstanding. Use when triaging, grooming, or reviewing a repository's open issues and PRs.

This skill should be used when the user asks to "open source this project", "prepare this repository for public release", "make this repo public", "check open-source readiness", "choose a license for this project", or "set up release automation" ahead of a public launch. Provides a release-readiness workflow covering secrets hygiene, licensing, documentation, CI, and language-specific packaging.

Selects bounded, graph-informed source slices with Trailmark and delegates focused code analysis or patch-proposal work to a smaller subagent. Use when offloading function-, class-, caller-, callee-, call-path-, entrypoint-, or line-focused code tasks to constrained or locally hosted models without exposing the full repository.

Prepares codebases for security review using Trail of Bits' checklist. Helps set review goals, runs static analysis tools, increases test coverage, removes dead code, ensures accessibility, and generates documentation (flowcharts, user stories, inline comments). Use when preparing your own codebase to be audited by someone else, getting a repository review-ready before an external security review, deciding what to fix before auditors start, or asking what assessors need from a project. For understanding unfamiliar code you are about to audit, use audit-context-building instead.

Automatically detect source types and build AI skills using Skill Seekers. Use when the user wants to create skills from documentation, repos, PDFs, videos, or other knowledge sources.

Automatically detect source types and build AI skills using Skill Seekers. Use when the user wants to create skills from documentation, repos, PDFs, videos, or other knowledge sources.

Retrieves, versions, and publishes scientific datasets with DataLad and git-annex, and captures computational provenance with datalad run, rerun, and containers-run. Use when cloning or fetching data from OpenNeuro, DANDI, datasets.datalad.org, or any DataLad dataset; when a file in a dataset reads as a broken symlink or a small pointer instead of real data; when an analysis needs a machine-readable record of how each output was produced so it can be re-executed; or when publishing a dataset to siblings such as a GitHub repository plus a storage remote. Also use to decide between DataLad and plain Git for a data-carrying repository.

Searches and reads biomedical papers, FDA/PMDA/EMA documents, clinical trials, and protein records with the GXL Paperclip CLI and Python SDK. Supports source-scoped search, full-text grep, metadata SQL, map/reduce extraction, figure analysis, optional repositories and claim verification, and line-pinned citations. Use when a task names GXL paperclip, asks to install or authenticate it, or requests literature retrieval and evidence extraction through Paperclip.

Searches 18 scholarly APIs for papers, preprints, citations, open-access full text, repository records, and journal OA status, and returns results with reproducible provenance. Covers PubMed, PMC, Europe PMC, bioRxiv, medRxiv, arXiv, OpenAlex, Crossref, Semantic Scholar, CORE, Unpaywall, OpenCitations, PubTator3, Zenodo, Figshare, ROR, BioStudies, and DOAJ. Use when searching for papers, citations, DOI/PMID/arXiv lookups, abstracts, full text, open-access PDFs, preprints, citation graphs, author publications, biomedical entity annotations, deposited records (Zenodo, Figshare, BioStudies), institution ROR IDs, or any scholarly literature query. Triggers on mentions of any supported database or requests like "find papers on X", "look up this DOI", "who cites this paper", or "get me the PDF".

This repository contains a hand-curated resources for Prompt Engineering with a focus on Generative Pre-trained Transformer (GPT), ChatGPT, PaLM etc

High-performance code-intelligence engine for AI agents and IDE, supports 257 languages, multi repositories, based on graph, with access via CLI, MCP Server, and API. AI coding agents teammate - expose only needed information, cutting token usage up to 50x. 100% local. Discord: https://discord.gg/39MFHu3J5d

This repository is for the first comprehensive survey on Meta AI's Segment Anything Model (SAM).